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Congenital malformation of the gastrointestinal tract

Authoring team

Major congenital malformations in the gastrointestinal system tend to be the result of an agent affecting organogenesis during the period from the third to the eighth week of pregnancy.

The intestinal loops return to the abdomen by the twelfth week of pregnancy.

Abnormalities include:

  • oesophageal atresia
  • Caroli's disease
  • biliary atresia
  • gut malrotation
  • omphalocoele
  • imperforate anus
  • cleft lip and palate
  • Hirschsprung's disease
  • pyloric stenosis
  • duodenal atresia

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The content herein is provided for informational purposes and does not replace the need to apply professional clinical judgement when diagnosing or treating any medical condition. A licensed medical practitioner should be consulted for diagnosis and treatment of any and all medical conditions.

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